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Browsing publications by Dr Matthew Pocock.

Newcastle AuthorsTitleYearFull text
Dr Christopher Johnson
Matthew Setterfield
Professor Anil Wipat
Dr Matthew Pocock
Dr Neil Keegan
et al.
Multiplex detection of the big five carbapenemase genes using solid-phase recombinase polymerase amplification2024
Dr Matthew Pocock
Dr Curtis Madsen
Dr Goksel Misirli
Professor Anil Wipat
Proposed Data Model for the Next Version of the Synthetic Biology Open Language2015
Dr Goksel Misirli
Dr Matthew Pocock
The Synthetic Biology Open Language2015
Dr Matthew Pocock
Dr Jennifer Hallinan
Dr Goksel Misirli
Professor Anil Wipat
The Synthetic Biology Open Language (SBOL) provides a community standard for communicating designs in synthetic biology2014
Dr Goksel Misirli
Professor Anil Wipat
Joseph Mullen
Dr Katherine James
Dr Matthew Pocock
et al.
BacillOndex: An Integrated Data Resource for Systems and Synthetic Biology2013
Dr Keith Flanagan
Dr Sirintra Nakjang
Dr Jennifer Hallinan
Professor Colin Harwood
Professor Robert Hirt
et al.
Microbase2.0: a generic framework for computationally intensive bioinformatics workflows in the cloud2012
Dr Goksel Misirli
Dr Jennifer Hallinan
Dr Matthew Pocock
Dr Simon Cockell
Jochen Weile
et al.
BacillOndex: An Integrated Data Resource for Systems and Synthetic Biology2011
Dr Allyson Lister
Dr Matthew Pocock
Professor Darren Wilkinson
Controlled vocabularies and semantics in systems biology2011
Dr Allyson Lister
Dr Matthew Pocock
Professor Darren Wilkinson
Controlled vocabularies and semantics in systems biology2011
Jochen Weile
Dr Matthew Pocock
Dr Simon Cockell
Dr Phillip Lord
James Dewar
et al.
Customizable views on semantically integrated networks for systems biology2011
Dr Simon Cockell
Jochen Weile
Dr Phillip Lord
Dmytro Andriychenko
Dr Matthew Pocock
et al.
An integrated dataset for in silico drug discovery2010
Dr Allyson Lister
Dr Phillip Lord
Dr Matthew Pocock
Professor Anil Wipat
Annotation of SBML Models Through Rule-Based Semantic Integration2009
Dr Jennifer Hallinan
Dr Matthew Pocock
Dr Stephen Addinall
Professor David Lydall
Professor Anil Wipat
et al.
Clustering incorporating shortest paths identifies relevant modules in functional interaction networks2009
Dr Allyson Lister
Dr Frank Gibson
Dr Phillip Lord
Dr Matthew Pocock
Professor Anil Wipat
et al.
Modeling and Managing Experimental Data Using FuGE2009
Dr Phillip Lord
Dr Allyson Lister
Dr Matthew Pocock
Modeling biomedical experimental processes with OBI2009
Dr Allyson Lister
Dr Matthew Pocock
Morgan Taschuk
Professor Anil Wipat
Saint: A Lightweight Integration Environment for Model Annotation2009
Dr Allyson Lister
Dr Matthew Pocock
Professor Anil Wipat
Saint: a lightweight SBML annotation integration environment2009
Dr Matthew Pocock
BioJava: An open-source framework for bioinformatics2008
Dr Matthew Pocock
Performing statistical analyses on quantitative data in Taverna workflows: An example using R and maxdBrowse to identify differentially-expressed genes from microarray data2008
Professor Anil Wipat
Dr Matthew Pocock
Professor Pete Lee
Dr Keith Flanagan
James Worthington
et al.
Exploring microbial genome sequences to identify protein families on the grid2007
Dr Allyson Lister
Dr Matthew Pocock
Dr Oliver Shaw
Professor Anil Wipat
Implementing the FuGE Object Model: a Systems Biology Data Portal and Integrator2007
Dr Allyson Lister
Dr Matthew Pocock
Professor Anil Wipat
Integration of constraints documented in SBML, SBO, and the SBML Manual facilitates validation of biological models2007
Dr Allyson Lister
Dr Matthew Pocock
Professor Anil Wipat
Integration of constraints documented in SBML, SBO, and the SBML Manual facilitates validation of biological models2007
Dr Frank Gibson
Professor Anil Wipat
Dr Matthew Pocock
Dr Nick Morris
GELI: a data model for the representation of a gel electrophoresis experiment2006
Dr Matthew Pocock
Dr Peter Li
Taverna: A tool for building and running workflows of services2006
Dr Peter Li
Dr Phillip Lord
Dr Matthew Pocock
Professor Anil Wipat
Taverna: lessons in creating a workflow environment for the life sciences2006
Professor Anil Wipat
Dr Matthew Pocock
Professor Pete Lee
Professor Paul Watson
Dr Keith Flanagan
et al.
A grid-based system for microbial genome comparison and analysis2005
Dr Yudong Sun
Professor Anil Wipat
Dr Matthew Pocock
Professor Pete Lee
Dr Keith Flanagan
et al.
Exploring Microbial Genome Sequences to Identify Protein Families on the Grid2005
Dr Yudong Sun
Professor Anil Wipat
Dr Matthew Pocock
Professor Pete Lee
Professor Paul Watson
et al.
A Grid-based System for Microbial Genome Comparison and Analysis2004
Professor Anil Wipat
Dr Yudong Sun
Dr Matthew Pocock
Professor Pete Lee
Professor Paul Watson
et al.
Developing Grid-based Systems for Microbial Genome2004
Dr Keith Flanagan
Dr Matthew Pocock
Professor Pete Lee
Professor Anil Wipat
Ontology for genome comparison and genomic rearrangements2004
Dr Matthew Pocock
Professor Anil Wipat
Dr Peter Li
Taverna: A tool for the composition and enactment of bioinformatics workflows2004