Browse by author
Lookup NU author(s): Dr Goksel Misirli, Dr Jennifer Hallinan, Dr Matthew Pocock, Dr Simon CockellORCiD, Jochen Weile, Professor Anil Wipat
BacillOndex is a semantically-rich, integrated knowledge base for Bacillus subtilis. The system comprises a software plug-in for the Ondex system, allowing a user to mine a variety of Bacillus subtilis data sources, together with the resulting integrated dataset that contains data about genes, gene products and their interactions. The data are presented in a computationally amenable format, and can be visualized using the data integration tool Ondex.Availability and Implementation: The BacillOndex dataset, the Ondex plug-in and the workflow files are freely available at http://research.ncl.ac.uk/synthetic_biology/downloads.html
Author(s): Misirli G, Hallinan JS, Pocock M, Cockell SJ, Weile J, Wipat A
Publication type: Report
Publication status: Published
Series Title: School of Computing Science Technical Report Series
Year: 2011
Pages: 5
Print publication date: 01/02/2011
Source Publication Date: February 2011
Report Number: 1237
Institution: School of Computing Science, University of Newcastle upon Tyne
Place Published: Newcastle upon Tyne
URL: http://www.cs.ncl.ac.uk/publications/trs/papers/1237.pdf
