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Amycolatopsis rhabdoformis sp. nov., an actinomycete isolated from a tropical forest soil

Lookup NU author(s): Professor Michael Goodfellow, Kanungrid Busarakam

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Abstract

Strain SB026(T) was isolated from Brazilian rainforest soil and its taxonomic position established using data from a polyphasic study. The organism showed a combination of chemotaxonomic and morphological features consistent with its classification in the genus Amycolatopsis and formed a branch in the Amycolatopsis 16S rRNA gene tree together with Amycolatopsis bullii NRRL B24847(T), Amycolatopsis plumensis NRRL B-24324(T), Amycolatopsis tolypomycina DSM 44544(T) and Amycolatopsis vancoresmycina NRRL B-24208(T). It was related most closely to A. bullii NRRL B-24847(T) (99.0% 16S rRNA gene sequence similarity), but was distinguished from this strain by a low level of DNA DNA relatedness (similar to 46 %) and discriminatory phenotypic properties. Based on the combined genotypic and phenotypic data, it is proposed that the isolate should be classified in the genus Amycolatopsis as representing a novel species, Amycolatopsis rhabdoformis sp. nov. The type strain is SB026(T) (=CBMAI 1694(T)=CMAA 1285(T)=NCIMB 14900(T)).


Publication metadata

Author(s): Souza WR, Silva RE, Goodfellow M, Busarakam K, Figueiro FS, Ferreira D, Rodrigues E, Moraes LAB, Zucchi TD

Publication type: Article

Publication status: Published

Journal: International Journal of Systematic and Evolutionary Microbiology

Year: 2015

Volume: 65

Pages: 1786-1793

Print publication date: 01/06/2015

Online publication date: 01/06/2015

Acceptance date: 01/01/1900

ISSN (print): 1466-5026

ISSN (electronic): 1466-5034

Publisher: The Microbiology Society

URL: http://dx.doi.org/10.1099/ijs.0.000176

DOI: 10.1099/ijs.0.000176


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Funding

Funder referenceFunder name
Emeritus Fellowship
11/50243-1FAPESP (Fundacao de Amparo a Pesquisa do Estado de Sao Paulo)
12/03363-4FAPESP (Fundacao de Amparo a Pesquisa do Estado de Sao Paulo)
13/03972-3FAPESP (Fundacao de Amparo a Pesquisa do Estado de Sao Paulo)
11/14333-6FAPESP (Fundacao de Amparo a Pesquisa do Estado de Sao Paulo)
12/01904-8FAPESP (Fundacao de Amparo a Pesquisa do Estado de Sao Paulo)

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