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The BioDynaMo Project: creating a platform for large-scale reproducible biological simulations

Lookup NU author(s): Dr Roman Bauer, Professor Marcus Kaiser

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This work is licensed under a Creative Commons Attribution 4.0 International License (CC BY 4.0).


Abstract

Computer simulations have become a very powerful tool for scientific research. In order to facilitate research in computational biology, the BioDynaMo project aims at a general platform for biological computer simulations, which should be executable on hybrid cloud computing systems. This paper describes challenges and lessons learnt during the early stages of the software development process, in the context of implementation issues and the international nature of the collaboration.


Publication metadata

Author(s): Breitwieser L, Bauer R, DiMeglio A, Johard L, Kaiser M, Manca M, Mazzara M, Rademakers F, Talanov M

Publication type: Conference Proceedings (inc. Abstract)

Publication status: Published

Conference Name: 4th Workshop on Sustainable Software for Science: Practice and Experiences

Year of Conference: 2016

Online publication date: 17/08/2016

Acceptance date: 01/08/2016

ISSN: 1613-0073

Publisher: CEUR Workshop Proceedings

URL: http://ceur-ws.org/Vol-1686/WSSSPE4_paper_14.pdf


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