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Streptomyces tsukubaensis as a new model for carbon repression: transcriptomic response to tacrolimus repressing carbon sources

Lookup NU author(s): Dr Fernando Santos Beneit

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Abstract

© 2017 Springer-Verlag GmbH Germany In this work, we identified glucose and glycerol as tacrolimus repressing carbon sources in the important species Streptomyces tsukubaensis. A genome-wide analysis of the transcriptomic response to glucose and glycerol additions was performed using microarray technology. The transcriptional time series obtained allowed us to compare the transcriptomic profiling of S. tsukubaensis growing under tacrolimus producing and non-producing conditions. The analysis revealed important and different metabolic changes after the additions and a lack of transcriptional activation of the fkb cluster. In addition, we detected important differences in the transcriptional response to glucose between S. tsukubaensis and the model species Streptomyces coelicolor. A number of genes encoding key players of morphological and biochemical differentiation were strongly and permanently downregulated by the carbon sources. Finally, we identified several genes showing transcriptional profiles highly correlated to that of the tacrolimus biosynthetic pathway regulator FkbN that might be potential candidates for the improvement of tacrolimus production.


Publication metadata

Author(s): Ordonez-Robles M, Santos-Beneit F, Albillos SM, Liras P, Martin JF, Rodriguez-Garcia A

Publication type: Article

Publication status: Published

Journal: Applied Microbiology and Biotechnology

Year: 2017

Volume: 101

Issue: 22

Pages: 8181-8195

Print publication date: 01/11/2017

Online publication date: 05/10/2017

Acceptance date: 18/09/2017

ISSN (print): 0175-7598

ISSN (electronic): 1432-0614

Publisher: Springer Verlag

URL: https://doi.org/10.1007/s00253-017-8545-5

DOI: 10.1007/s00253-017-8545-5


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