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Translation of cytoplasmic UBA1 contributes to VEXAS syndrome pathogenesis

Lookup NU author(s): Dr Christopher DuncanORCiD

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This is the authors' accepted manuscript of an article that has been published in its final definitive form by American Society of Hematology, 2022.

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Abstract

Somatic mutations in UBA1 cause VEXAS (Vacuoles, E1 ubiquitin activating enzyme, X-linked, Autoinflammatory Somatic) syndrome, an adult-onset inflammatory disease with an overlap of hematologic manifestations. VEXAS syndrome is characterized by a high mortality rate and significant clinical heterogeneity. We sought to determine independent predictors of survival in VEXAS and to understand the mechanistic basis for these factors. We analyzed 83 patients with somatic pathogenic variants in UBA1 at p.Met41 (p.Met41Leu/Thr/Val), the start codon for translation of the cytoplasmic isoform of UBA1 (UBA1b). Patients with the p.Met41Val genotype were most likely to have an undifferentiated inflammatory syndrome. Multivariate analysis showed ear chondritis was associated with increased survival, while transfusion dependence and the p.Met41Val variant were independently associated with decreased survival. Using in vitro models and patient-derived cells, we demonstrate that p.Met41Val variant supports less UBA1b translation than either p.Met41Leu or p.Met41Thr, providing a molecular rationale for decreased survival. In addition, we show that these three canonical VEXAS variants produce more UBA1b than any of the six other possible single nucleotide variants within this codon. Finally, we report a patient, clinically diagnosed with VEXAS syndrome, with two novel mutations in UBA1 occurring in cis on the same allele. One mutation (c.121 A>T; p.Met41Leu) caused severely reduced translation of UBA1b in a reporter assay, but co- expression with the second mutation (c.119 G>C; p.Gly40Ala) rescued UBA1b levels to those of canonical mutations. We conclude that regulation of residual UBA1b translation is fundamental to the pathogenesis of VEXAS syndrome and contributes to disease prognosis.


Publication metadata

Author(s): Ferrada MA, Savic S, Collins JC, Alessi H, Gutierrez-Rodrigues F, Kumar DBU, Wilson L, Goodspeed W, Topilow JS, Paik JJ, Poulter JA, Kermani TA, Koster MJ, Warrington KJ, Cargo C, Tattersall RS, Duncan CJA, Cantor A, Hoffmann P, Payne EM, Bonnekoh H, Krause K, Cowen EW, Calvo KR, Patel BA, Ombrello AK, Kastner DL, Young NS, Werner A, Grayson PC, Beck DB

Publication type: Article

Publication status: Published

Journal: Blood

Year: 2022

Volume: 140

Issue: 13

Pages: 1496-1506

Print publication date: 29/09/2022

Online publication date: 06/07/2022

Acceptance date: 22/06/2022

Date deposited: 23/06/2022

ISSN (print): 0006-4971

ISSN (electronic): 1528-0020

Publisher: American Society of Hematology

URL: https://doi.org/10.1182/blood.2022016985

DOI: 10.1182/blood.2022016985

ePrints DOI: 10.57711/bvk9-z053


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Funding

Funder referenceFunder name
211153/Z/18/ZWellcome Trust
K23AR073927
National Human Genome Research Institute (NHGRI)
National Institute of Dental and Craniofacial Research (NIDCR)
National Institutes of Arthritis and Musculoskeletal and Skin Diseases (NIAMS)
R00AR078205

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